Stem-loop ami-mir-122

Accession

MI0029716

Description

Alligator mississippiensis ami-mir-122 precursor miRNA

Sequence

uacuaucagagcugUGGAGUGUGACAAUGGUGUUUGuguccaaucuaucaAACGCCAUUAUCACACUAAAuagcuacuguuagaua
..(((.(((((((((..(((((((.(((((((((((............))))))))))).)))))))..)))))).))).)))...

Structure

-ua   u   -      GG       C           ugucc 
   cua cag agcugU  AGUGUGA AAUGGUGUUUG     a
   ||| ||| ||||||  ||||||| |||||||||||      
   gau guc ucgauA  UCACACU UUACCGCAAac     a
aua   u   a      AA       A           uaucu 

Annotation confidence Not enough data

Genome context

AKHW03004724.1: 15598707-15598792 [+]

Mature ami-miR-122-5p

• Accession: MIMAT0038123
• Description: Alligator mississippiensis ami-miR-122-5p mature miRNA
• Sequence: 15 - UGGAGUGUGACAAUGGUGUUUG - 36
• Evidence: experimental ; Illumina [1]

Mature ami-miR-122-3p

• Accession: MIMAT0038124
• Description: Alligator mississippiensis ami-miR-122-3p mature miRNA
• Sequence: 51 - AACGCCAUUAUCACACUAAA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196