Stem-loop ami-mir-124-1

Accession

MI0029717

Description

Alligator mississippiensis ami-mir-124-1 precursor miRNA

Sequence

ggccccgcggccccucucugCGUGUUCACAGCGGACCUUGAUuuaaauguccauacaauUAAGGCACGCGGUGAAUGCCAagaacggggccgccucgc
.((...((((((((..(((..((((((((.(((..((((((((.............))))))))..))).))))))))..)))..))))))))...))

Structure

g  ccc        uc   gC        A   GA        uaaau 
 gc   gcggcccc  ucu  GUGUUCAC GCG  CCUUGAUu     g
 ||   ||||||||  |||  |||||||| |||  ||||||||     u
 cg   cgccgggg  aga  CGUAAGUG CGC  GGAAUuaa     c
-  cuc        ca   AC        G   AC        cauac 

Annotation confidence Not enough data

Genome context

AKHW03001328.1: 1926491-1926588 [-]

Mature ami-miR-124-5p

• Accession: MIMAT0038125
• Description: Alligator mississippiensis ami-miR-124-5p mature miRNA
• Sequence: 21 - CGUGUUCACAGCGGACCUUGAU - 42
• Evidence: experimental ; Illumina [1]

Mature ami-miR-124-3p

• Accession: MIMAT0038126
• Description: Alligator mississippiensis ami-miR-124-3p mature miRNA
• Sequence: 60 - UAAGGCACGCGGUGAAUGCCA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196