Stem-loop ami-mir-124-2

Accession

MI0029718

Description

Alligator mississippiensis ami-mir-124-2 precursor miRNA

Sequence

uucccggggcucucgccucucCGUGUUCACAGCGGACCUUGAUuuaaugucauacaauUAAGGCACGCGGUGAAUGCCAagagcggagccggaag
((((...(((((.(((.(((..((((((((.(((..((((((((...........))))))))..))).))))))))..))))))))))))))).

Structure

-    cgg     u   c   cC        A   GA        uaau 
 uucc   ggcuc cgc ucu  GUGUUCAC GCG  CCUUGAUu    g
 ||||   ||||| ||| |||  |||||||| |||  ||||||||    u
 aagg   ccgag gcg aga  CGUAAGUG CGC  GGAAUuaa    c
g    ---     -   -   AC        G   AC        caua 

Annotation confidence Not enough data

Genome context

AKHW03005657.1: 12011211-12011305 [-]

Mature ami-miR-124-5p

• Accession: MIMAT0038125
• Description: Alligator mississippiensis ami-miR-124-5p mature miRNA
• Sequence: 22 - CGUGUUCACAGCGGACCUUGAU - 43
• Evidence: experimental ; Illumina [1]

Mature ami-miR-124-3p

• Accession: MIMAT0038126
• Description: Alligator mississippiensis ami-miR-124-3p mature miRNA
• Sequence: 59 - UAAGGCACGCGGUGAAUGCCA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196