Stem-loop ami-mir-124-3

Accession

MI0029719

Description

Alligator mississippiensis ami-mir-124-3 precursor miRNA

Sequence

ccaggcgagccccucucugCGUGUUCACAGCGGACCUUGAUuuaauguccauacaauUAAGGCACGCGGUGAAUGCCAagagaggagccucacagc
....(.((((.(((((((..((((((((.(((..((((((((............))))))))..))).))))))))..))))))).).))).)...

Structure

ccag c   - c       gC        A   GA        uaaug 
    g gag c ccucucu  GUGUUCAC GCG  CCUUGAUu     u
    | ||| | |||||||  |||||||| |||  ||||||||      
    c cuc g ggagaga  CGUAAGUG CGC  GGAAUuaa     c
-cga a   c a       AC        G   AC        cauac 

Annotation confidence Not enough data

Genome context

AKHW03001485.1: 760217-760312 [-]

Mature ami-miR-124-5p

• Accession: MIMAT0038125
• Description: Alligator mississippiensis ami-miR-124-5p mature miRNA
• Sequence: 20 - CGUGUUCACAGCGGACCUUGAU - 41
• Evidence: experimental ; Illumina [1]

Mature ami-miR-124-3p

• Accession: MIMAT0038126
• Description: Alligator mississippiensis ami-miR-124-3p mature miRNA
• Sequence: 58 - UAAGGCACGCGGUGAAUGCCA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196