Stem-loop ami-mir-129b

Accession

MI0029728

Description

Alligator mississippiensis ami-mir-129b precursor miRNA

Sequence

cuucgcgaauCUUUUUGCGGUCUGGGCUUGCuguacauaacuaccuagccgggAAGCCCUUACCCCAAAAAGCAUucgcggag
(((((((((((((((((.(((..((((((.(((................))).))))))..))).))))))).))))))))))

Structure

          -       C   CU      G   uacauaa 
cuucgcgaau CUUUUUG GGU  GGGCUU Cug       c
|||||||||| ||||||| |||  |||||| |||        
gaggcgcuUA GAAAAAC CCA  CCCGAA ggc       u
          C       C   UU      g   cgaucca 

Annotation confidence Not enough data

Genome context

AKHW03006283.1: 10867512-10867594 [-]

Mature ami-miR-129b-5p

• Accession: MIMAT0038138
• Description: Alligator mississippiensis ami-miR-129b-5p mature miRNA
• Sequence: 11 - CUUUUUGCGGUCUGGGCUUGC - 31
• Evidence: experimental ; Illumina [1]

Mature ami-miR-129b-3p

• Accession: MIMAT0038139
• Description: Alligator mississippiensis ami-miR-129b-3p mature miRNA
• Sequence: 54 - AAGCCCUUACCCCAAAAAGCAU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196