Stem-loop ami-mir-135-2

Accession

MI0029738

Description

Alligator mississippiensis ami-mir-135-2 precursor miRNA

Sequence

uaaauucacucuaguguuuUAUGGCUUUUUAUUCCUAUGUGauaguaauaaagucucAUGUAGGGAUGGAAGCCAUGAAauacauugugaaaaa
....(((((....((((((((((((((((.((((((((((((.(.(.....).).))))))))))))))))))))))))))))...)))))...

Structure

uaaa     ucua                U            u g a 
    uucac    guguuuUAUGGCUUUU AUUCCUAUGUGa a u a
    |||||    |||||||||||||||| |||||||||||| | | u
    aagug    cauaAAGUACCGAAGG UAGGGAUGUAcu u a a
-aaa     -uua                -            c g a 

Annotation confidence Not enough data

Genome context

AKHW03007000.1: 12728170-12728263 [-]

Mature ami-miR-135-5p

• Accession: MIMAT0038149
• Description: Alligator mississippiensis ami-miR-135-5p mature miRNA
• Sequence: 20 - UAUGGCUUUUUAUUCCUAUGUG - 41
• Evidence: experimental ; Illumina [1]

Mature ami-miR-135-2-3p

• Accession: MIMAT0038151
• Description: Alligator mississippiensis ami-miR-135-2-3p mature miRNA
• Sequence: 58 - AUGUAGGGAUGGAAGCCAUGAA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196