Stem-loop ami-mir-187

Accession

MI0029770

Description

Alligator mississippiensis ami-mir-187 precursor miRNA

Sequence

ugugagaccuccgGCUACAACACAGGACAUGGGAGcuuuucugaacccUCGUGUCUUGUGUUGCAGCCAgaggggcacauc
((((...((((.((((.((((((((((((((((.(.((....)).).)))))))))))))))).)))).))))..))))..

Structure

--    aga    c    A                A c  u 
  ugug   ccuc gGCU CAACACAGGACAUGGG G uu u
  ||||   |||| |||| |||||||||||||||| | ||  
  acac   ggag CCGA GUUGUGUUCUGUGCUc c ag c
cu    -gg    A    C                c a  u 

Annotation confidence Not enough data

Genome context

AKHW03006597.1: 1380487-1380567 [+]

Mature ami-miR-187-5p

• Accession: MIMAT0038200
• Description: Alligator mississippiensis ami-miR-187-5p mature miRNA
• Sequence: 14 - GCUACAACACAGGACAUGGGAG - 35
• Evidence: experimental ; Illumina [1]

Mature ami-miR-187-3p

• Accession: MIMAT0038201
• Description: Alligator mississippiensis ami-miR-187-3p mature miRNA
• Sequence: 49 - UCGUGUCUUGUGUUGCAGCCA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196