Stem-loop ami-mir-202

Accession

MI0029787

Description

Alligator mississippiensis ami-mir-202 precursor miRNA

Sequence

cucguuguuccuuUUUCCUAUGCAUAUACUUCUUUgagaauuggaucuaaagaggcauagggcaugggaaaauggggcgacugaggua
(((((((((((.(((((((((((.(((.(((((((.(((......)))))))))).)))..))))))))))).)))))))).)))...

Structure

---   -        u           -A   A       g   au 
   cuc guuguucc uUUUCCUAUGC  UAU CUUCUUU aga  u
   ||| |||||||| |||||||||||  ||| ||||||| |||   
   gag cagcgggg aaaaggguacg  aua ggagaaa ucu  g
aug   u        u           gg   c       -   ag 

Annotation confidence Not enough data

Genome context

AKHW03001467.1: 1910422-1910509 [-]

Mature ami-miR-202-5p

• Accession: MIMAT0038222
• Description: Alligator mississippiensis ami-miR-202-5p mature miRNA
• Sequence: 14 - UUUCCUAUGCAUAUACUUCUUU - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196