Stem-loop ami-mir-210

Accession

MI0029795

Description

Alligator mississippiensis ami-mir-210 precursor miRNA

Sequence

cuccagaagcaggugAGCCACUGACUAACGCACAUUgugcuguuagcgauuccaCUGUGCGUGUGACAGCGGCUAaccuguuuuucggacau
.(((((((((((((.((((.(((.(..(((((((.((((((...))))....)).)))))))..).))).)))).)))))))))).)))...

Structure

--c   -          g    A   A UA       U  ----    g 
   ucc agaagcaggu AGCC CUG C  ACGCACA Ug    ugcu  
   ||| |||||||||| |||| ||| |  ||||||| ||    |||| u
   agg uuuuugucca UCGG GAC G  UGCGUGU ac    gcga  
uac   c          A    C   A UG       C  cuua    u 

Annotation confidence Not enough data

Genome context

AKHW03001628.1: 24619679-24619770 [+]

Mature ami-miR-210-5p

• Accession: MIMAT0038234
• Description: Alligator mississippiensis ami-miR-210-5p mature miRNA
• Sequence: 16 - AGCCACUGACUAACGCACAUU - 36
• Evidence: experimental ; Illumina [1]

Mature ami-miR-210-3p

• Accession: MIMAT0038235
• Description: Alligator mississippiensis ami-miR-210-3p mature miRNA
• Sequence: 55 - CUGUGCGUGUGACAGCGGCUA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196