Stem-loop ami-mir-499

Accession

MI0029839

Description

Alligator mississippiensis ami-mir-499 precursor miRNA

Sequence

ugagagagcggcagUUAAGACUUGCAGUGAUGUUUagauaauguauuacaugAACAUCACUUUAAGUCUGUGCUacuucucuccuc
...(((((.((.(((..(((((((.(((((((((((..(((....)))..))))))))))).)))))))..))).)).)))))...

Structure

uga     c  c   UA       C           ga   u 
   gagag gg agU  AGACUUG AGUGAUGUUUa  uaa g
   ||||| || |||  ||||||| |||||||||||  |||  
   cucuc uc UCG  UCUGAAU UCACUACAAgu  auu u
cuc     u  a   UG       U           ac   a 

Annotation confidence Not enough data

Genome context

AKHW03003127.1: 324408-324493 [-]

Mature ami-miR-499-5p

• Accession: MIMAT0038301
• Description: Alligator mississippiensis ami-miR-499-5p mature miRNA
• Sequence: 15 - UUAAGACUUGCAGUGAUGUUU - 35
• Evidence: experimental ; Illumina [1]

Mature ami-miR-499-3p

• Accession: MIMAT0038302
• Description: Alligator mississippiensis ami-miR-499-3p mature miRNA
• Sequence: 53 - AACAUCACUUUAAGUCUGUGCU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196