Stem-loop ami-mir-1641

Accession

MI0029850

Description

Alligator mississippiensis ami-mir-1641 precursor miRNA

Sequence

agggcauuuccUGGGGAUUAAUGACUGUCUGGGgucaucaucuccucccaguuaguuauuaauccccaggaaauacuuuauaccuugauc
((((.((((((((((((((((((((((.((((((...........)))))).)))))))))))))))))))))).))))...........

Structure

-----------    c                      U      ucau 
           aggg auuuccUGGGGAUUAAUGACUG CUGGGg    c
           |||| |||||||||||||||||||||| ||||||    a
           uuuc uaaaggaccccuaauuauugau gacccu    u
cuaguuccaua    a                      u      ccuc 

Annotation confidence Not enough data

Genome context

AKHW03006178.1: 17046825-17046914 [-]

Mature ami-miR-1641-5p

• Accession: MIMAT0038317
• Description: Alligator mississippiensis ami-miR-1641-5p mature miRNA
• Sequence: 12 - UGGGGAUUAAUGACUGUCUGGG - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196