Stem-loop ami-mir-9605

Accession

MI0029872

Description

Alligator mississippiensis ami-mir-9605 precursor miRNA

Sequence

gucccaaauacacugcUGGAGUCAGUGGGUACAAGUCUguggagcugauagAGUUGUACAUGUUGACACAAGCagugaauuuggccg
...((((((.(((((((...(((((...((((((.(((((.......))))).))))))...)))))...))))))).))))))...

Structure

guc      a       GGA     UGG      G     gg 
   ccaaau cacugcU   GUCAG   GUACAA UCUgu  a
   |||||| |||||||   |||||   |||||| |||||  g
   gguuua gugaCGA   CAGUU   CAUGUU Agaua  c
gcc      a       ACA     GUA      G     gu 

Annotation confidence Not enough data

Genome context

AKHW03001210.1: 22946223-22946309 [+]

Mature ami-miR-9605-5p

• Accession: MIMAT0038354
• Description: Alligator mississippiensis ami-miR-9605-5p mature miRNA
• Sequence: 17 - UGGAGUCAGUGGGUACAAGUCU - 38
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9605-3p

• Accession: MIMAT0038355
• Description: Alligator mississippiensis ami-miR-9605-3p mature miRNA
• Sequence: 52 - AGUUGUACAUGUUGACACAAGC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196