Stem-loop ami-mir-9607

Accession

MI0029874

Description

Alligator mississippiensis ami-mir-9607 precursor miRNA

Sequence

cucacuguucccuuCUCUGUUCUUUUGCAUCUUUCAgaccaggaugAAAGAGCAGCAGAACUCAGCAGggagcagaaugag
(((((((((((((.((..(((((.((((.(((((((........))))))))))).)))))..)).)))))))))..))))

Structure

    --         u  CU     U    A       gac 
cuca  cuguucccu CU  GUUCU UUGC UCUUUCA   c
||||  ||||||||| ||  ||||| |||| |||||||    
gagu  gacgaggGA GA  CAAGA GACG AGAAAgu   a
    aa         C  CU     C    -       agg 

Annotation confidence Not enough data

Genome context

AKHW03003207.1: 16671359-16671439 [-]

Mature ami-miR-9607-5p

• Accession: MIMAT0038358
• Description: Alligator mississippiensis ami-miR-9607-5p mature miRNA
• Sequence: 15 - CUCUGUUCUUUUGCAUCUUUCA - 36
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9607-3p

• Accession: MIMAT0038359
• Description: Alligator mississippiensis ami-miR-9607-3p mature miRNA
• Sequence: 47 - AAAGAGCAGCAGAACUCAGCAG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196