miRBase entry: cli-mir-29b-2

Stem-loop cli-mir-29b-2

Accession

MI0029929

Description

Columba livia cli-mir-29b-2 precursor miRNA

Sequence

ccucuggaagcugguuucacaugguggcuuagauuuucccacuuuguaucUAGCACCAUUUGAAAUCAGUGUUcuaggag
..(((((((((((((((((.((((((.((.((((.............)))))))))))).)))))))))).)))))))..

Structure

cc       -          c      g  u    uuucc 
  ucuggaa gcugguuuca auggug cu agau     c
  ||||||| |||||||||| |||||| || ||||     a
  ggaucUU UGACUAAAGU UACCAC GA Ucua     c
ga       G          U      -  -    uguuu

Annotation confidence Not enough data

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Genome context

KB375734.1: 2208559-2208638 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cli-mir-29b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-miR-29b-3p

Accession	MIMAT0038450
Description	Columba livia cli-miR-29b-3p mature miRNA
Sequence	51 - UAGCACCAUUUGAAAUCAGUGUU - 73
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196