Stem-loop cli-mir-140

Accession

MI0029976

Description

Columba livia cli-mir-140 precursor miRNA

Sequence

uccguguccugcCAGUGGUUUUACCCUAUGGUAGguuacgucaugcuguucuACCACAGGGUAGAACCACGGACgggaugcugg
.((((((((((((.(((((((((((((.(((((((.((.((...)))).))))))).))))))))))))))).)))))))).))

Structure

u  -        -  A             A       u  c  c 
 cc guguccug cC GUGGUUUUACCCU UGGUAGg ua gu  
 || |||||||| || ||||||||||||| ||||||| || || a
 gg cguagggC GG CACCAAGAUGGGA ACCAucu gu cg  
-  u        A  -             C       u  -  u 

Annotation confidence Not enough data

Genome context

KB375448.1: 5480462-5480545 [-]

Mature cli-miR-140-5p

• Accession: MIMAT0038527
• Description: Columba livia cli-miR-140-5p mature miRNA
• Sequence: 13 - CAGUGGUUUUACCCUAUGGUAG - 34
• Evidence: experimental ; Illumina [1]

Mature cli-miR-140-3p

• Accession: MIMAT0038528
• Description: Columba livia cli-miR-140-3p mature miRNA
• Sequence: 53 - ACCACAGGGUAGAACCACGGAC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196