miRBase entry: cli-mir-181b-2

Stem-loop cli-mir-181b-2

Accession

MI0029992

Description

Columba livia cli-mir-181b-2 precursor miRNA

Sequence

cuaauggcugcaaucAACAUUCAUUGCUGUCGGUGGGUUuucuuuucugucaaCUCACUGAUCAAUGAAUGCAAAcugcggaccagcc
....((((((((.....(((((((((..(((((((((((..(......)..)))))))))))))))))))).....))))).)))...

Structure

cuaa   -     aucAA         CU           uu uu 
    ugg cugca     CAUUCAUUG  GUCGGUGGGUU  c  u
    ||| |||||     |||||||||  |||||||||||  |   
    acc ggcgu     GUAAGUAAC  UAGUCACUCaa  g  u
-ccg   a     cAAAC         --           cu uc

Annotation confidence Not enough data

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Genome context

KB375970.1: 918296-918383 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cli-mir-181b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-miR-181b-5p

Accession	MIMAT0038553
Description	Columba livia cli-miR-181b-5p mature miRNA
Sequence	16 - AACAUUCAUUGCUGUCGGUGGGUU - 39
Evidence	experimental Illumina [1]

Mature cli-miR-181b-2-3p

Accession	MIMAT0038555
Description	Columba livia cli-miR-181b-2-3p mature miRNA
Sequence	54 - CUCACUGAUCAAUGAAUGCAAA - 75
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196