Stem-loop cli-mir-210

Accession

MI0030014

Description

Columba livia cli-mir-210 precursor miRNA

Sequence

cccuccaggagcaggugAGCCACUGACUAACGCACAUUGugcucucggcgacuccaCUGUGCGUGUGACAGCGGCUAAccugcuccucggacau
...(((((((((((((.((((.(((.(..(((((((.((((((...))))....)).)))))))..).))).)))).)))))))))).)))...

Structure

ccc   -          g    A   A UA       U  ----    c 
   ucc aggagcaggu AGCC CUG C  ACGCACA UG    ugcu  
   ||| |||||||||| |||| ||| |  ||||||| ||    |||| u
   agg uccucguccA UCGG GAC G  UGCGUGU ac    gcgg  
uac   c          A    C   A UG       C  cuca    c 

Annotation confidence Not enough data

Genome context

KB375641.1: 1057655-1057748 [-]

Mature cli-miR-210-5p

• Accession: MIMAT0038590
• Description: Columba livia cli-miR-210-5p mature miRNA
• Sequence: 18 - AGCCACUGACUAACGCACAUUG - 39
• Evidence: experimental ; Illumina [1]

Mature cli-miR-210-3p

• Accession: MIMAT0038591
• Description: Columba livia cli-miR-210-3p mature miRNA
• Sequence: 57 - CUGUGCGUGUGACAGCGGCUAA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196