Stem-loop cli-mir-9636

Accession

MI0030116

Description

Columba livia cli-mir-9636 precursor miRNA

Sequence

cgcucccCGCAAAACCAGUGGGUACCUUGUAgaagggacugguggagaguggaCAAGUACCCGCUGGUUUGCUUGgggaggu
..(((((((((((.(((((((((((.((((.......(((.......)))..))))))))))))))))))))..))))))..

Structure

cg      --     A           C    Agaaggg   gg 
  cucccC  GCAAA CCAGUGGGUAC UUGU       acu  u
  ||||||  ||||| ||||||||||| ||||       |||  g
  gagggG  CGUUU GGUCGCCCAUG AACa       uga  g
ug      UU     -           -    -----gg   ga 

Annotation confidence Not enough data

Genome context

KB377187.1: 232473-232554 [+]

Mature cli-miR-9636-5p

• Accession: MIMAT0038765
• Description: Columba livia cli-miR-9636-5p mature miRNA
• Sequence: 8 - CGCAAAACCAGUGGGUACCUUGUA - 31
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9636-3p

• Accession: MIMAT0038766
• Description: Columba livia cli-miR-9636-3p mature miRNA
• Sequence: 54 - CAAGUACCCGCUGGUUUGCUUG - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196