Stem-loop pbv-mir-29b-1

Accession

MI0030181

Description

Python bivittatus pbv-mir-29b-1 precursor miRNA

Sequence

ugugucuuccucuggaagCUGGUUUCACAUGGUGGCUUAGAUuuuuccaucucuguauCUAGCACCAUUUGAAAUCAGUGuucuaggagcaagaauuaca
((((((((.((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).))))).))).))))..))))

Structure

    --    c   -     -          C      G  U    uuuucc 
ugug  ucuu cuc uggaa gCUGGUUUCA AUGGUG CU AGAU      a
||||  |||| ||| ||||| |||||||||| |||||| || ||||       
acau  agaa gag aucuu UGACUAAAGU UACCAC GA UCua      u
    ua    c   g     G          U      -  -    ugucuc 

Annotation confidence Not enough data

Genome context

KE953855.1: 171263-171362 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pbv-mir-29b-1

Mature pbv-miR-29b-5p

• Accession: MIMAT0038868
• Description: Python bivittatus pbv-miR-29b-5p mature miRNA
• Sequence: 19 - CUGGUUUCACAUGGUGGCUUAGAU - 42
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-29b-3p

• Accession: MIMAT0038869
• Description: Python bivittatus pbv-miR-29b-3p mature miRNA
• Sequence: 59 - CUAGCACCAUUUGAAAUCAGUG - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196