miRBase entry: pbv-mir-92a-1

Stem-loop pbv-mir-92a-1

Accession

MI0030196

Description

Python bivittatus pbv-mir-92a-1 precursor miRNA

Sequence

uuucuacacagguugggaucgguugcaaugcuguguugagucuguggUAUUGCACUUGUCCCGGCCUGUugagguugguggggcaag
.((((((((((((((((((.(((.(((((((((.(......)..)))))))))))).))))))))))))........))))))....

Structure

---u      --------            c   u         -u uu 
    uucuac        acagguugggau ggu gcaaugcug  g  g
    ||||||        |||||||||||| ||| |||||||||  |   
    ggggug        UGUCCGGCCCUG UCA CGUUAUggu  c  a
gaac      guuggagu            U   -         gu ug

Annotation confidence Not enough data

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Genome context

KE958468.1: 77447-77533 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from pbv-mir-92a-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pbv-miR-92a-3p

Accession	MIMAT0038889
Description	Python bivittatus pbv-miR-92a-3p mature miRNA
Sequence	48 - UAUUGCACUUGUCCCGGCCUGU - 69
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196