Stem-loop pbv-mir-122

Accession

MI0030210

Description

Python bivittatus pbv-mir-122 precursor miRNA

Sequence

uucugcuggagcuuUGGAGUGUGACAAUGGUGUUUGuauccaaucucucaAACGCCAUUAUCACACUAAAUAgcuacuguuaga
.((((.(((((((.(..(((((((.(((((((((((............))))))))))).)))))))..).)))).))).))))

Structure

u    c   -    u GG       C           uaucc 
 ucug ugg agcu U  AGUGUGA AAUGGUGUUUG     a
 |||| ||| |||| |  ||||||| |||||||||||      
 agau guc ucgA A  UCACACU UUACCGCAAac     a
-    u   a    U AA       A           ucucu 

Annotation confidence Not enough data

Genome context

KE953092.1: 34304-34387 [+]

Mature pbv-miR-122-5p

• Accession: MIMAT0038909
• Description: Python bivittatus pbv-miR-122-5p mature miRNA
• Sequence: 15 - UGGAGUGUGACAAUGGUGUUUG - 36
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-122-3p

• Accession: MIMAT0038910
• Description: Python bivittatus pbv-miR-122-3p mature miRNA
• Sequence: 51 - AACGCCAUUAUCACACUAAAUA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196