Stem-loop pbv-mir-124a-1

Accession

MI0030212

Description

Python bivittatus pbv-mir-124a-1 precursor miRNA

Sequence

cgaggcucugucucucCGUGUUCACAGCGGACCUUGAUuuaaugucauacaauUAAGGCACGCGGUGAAUGCCAAgagcagggcuugaag
..((((((((.((((..((((((((.(((..((((((((...........))))))))..))).))))))))..))))))))))))....

Structure

--cg        u    cC        A   GA        uaau 
    aggcucug cucu  GUGUUCAC GCG  CCUUGAUu    g
    |||||||| ||||  |||||||| |||  ||||||||    u
    uucgggac gagA  CGUAAGUG CGC  GGAAUuaa    c
gaag        -    AC        G   AC        caua 

Annotation confidence Not enough data

Genome context

KE957509.1: 32622-32711 [-]

Mature pbv-miR-124a-5p

• Accession: MIMAT0038913
• Description: Python bivittatus pbv-miR-124a-5p mature miRNA
• Sequence: 17 - CGUGUUCACAGCGGACCUUGAU - 38
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-124a-3p

• Accession: MIMAT0038914
• Description: Python bivittatus pbv-miR-124a-3p mature miRNA
• Sequence: 54 - UAAGGCACGCGGUGAAUGCCAA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196