Stem-loop pbv-mir-124a-2

Accession

MI0030213

Description

Python bivittatus pbv-mir-124a-2 precursor miRNA

Sequence

ccugggcccuucucucCGUGUUCACAGCGGACCUUGAUuuaauguccauacaauUAAGGCACGCGGUGAAUGCCAAgagaccgguuccccu
...(((((..(((((..((((((((.(((..((((((((............))))))))..))).))))))))..)))))..)))))....

Structure

-ccu     cu     cC        A   GA        uaaug 
    gggcc  ucucu  GUGUUCAC GCG  CCUUGAUu     u
    |||||  |||||  |||||||| |||  ||||||||      
    cuugg  agagA  CGUAAGUG CGC  GGAAUuaa     c
uccc     cc     AC        G   AC        cauac 

Annotation confidence Not enough data

Genome context

KE954357.1: 247503-247593 [+]

Mature pbv-miR-124a-5p

• Accession: MIMAT0038913
• Description: Python bivittatus pbv-miR-124a-5p mature miRNA
• Sequence: 17 - CGUGUUCACAGCGGACCUUGAU - 38
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-124a-3p

• Accession: MIMAT0038914
• Description: Python bivittatus pbv-miR-124a-3p mature miRNA
• Sequence: 55 - UAAGGCACGCGGUGAAUGCCAA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196