Stem-loop pbv-mir-125b-2

Accession

MI0030217

Description

Python bivittatus pbv-mir-125b-2 precursor miRNA

Sequence

gacuuuuccuagUCCCUGAGACCCUAACUUGUGAgguuuuuuaguaacaaucACAAGUCAGGCUCUUGGGACCUaggcggaggggaacca
..((((.(((((((((.((((.(((.((((((((.(((.......)))..)))))))).))).)))))))).))))).))))........

Structure

------ga    u     -    U    C   A        -g   uu 
        cuuu ccuag UCCC GAGA CCU ACUUGUGA  guu  u
        |||| ||||| |||| |||| ||| ||||||||  |||  u
        gagg ggaUC AGGG UUCU GGA UGAACAcu  caa  a
accaaggg    c     C    -    C   C        aa   ug 

Annotation confidence Not enough data

Genome context

KE953041.1: 123172-123261 [+]

Mature pbv-miR-125b-5p

• Accession: MIMAT0038916
• Description: Python bivittatus pbv-miR-125b-5p mature miRNA
• Sequence: 13 - UCCCUGAGACCCUAACUUGUGA - 34
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-125b-3p

• Accession: MIMAT0038917
• Description: Python bivittatus pbv-miR-125b-3p mature miRNA
• Sequence: 53 - ACAAGUCAGGCUCUUGGGACCU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196