Stem-loop pbv-mir-129a

Accession

MI0030221

Description

Python bivittatus pbv-mir-129a precursor miRNA

Sequence

uucucucucggauCUUUUUGCGGUCUGGGCUUGCuguuccuccaauaaguagccaggAAGCCCUUACCCCAAAAAGUAuuugcgagggauc
.((((((.((((((((((((.(((..((((((.(((((.((......)).)).))).))))))..))).))))))).))))).))))))..

Structure

-u      u     -       C   CU      G   -  c  cc 
  ucucuc cggau CUUUUUG GGU  GGGCUU Cug uu cu  a
  |||||| ||||| ||||||| |||  |||||| ||| || ||   
  agggag guuuA GAAAAAC CCA  CCCGAA gac ga ga  a
cu      c     U       C   UU      g   c  u  au 

Annotation confidence Not enough data

Genome context

KE960689.1: 27983-28073 [+]

Mature pbv-miR-129a-5p

• Accession: MIMAT0038922
• Description: Python bivittatus pbv-miR-129a-5p mature miRNA
• Sequence: 14 - CUUUUUGCGGUCUGGGCUUGC - 34
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-129a-3p

• Accession: MIMAT0038923
• Description: Python bivittatus pbv-miR-129a-3p mature miRNA
• Sequence: 58 - AAGCCCUUACCCCAAAAAGUA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196