miRBase entry: pbv-mir-132

Stem-loop pbv-mir-132

Accession

MI0030227

Description

Python bivittatus pbv-mir-132 precursor miRNA

Sequence

gcgucuccagggcaACCGUGGCUUUAGAUUGUUACUguguggaugugggcuggUAACAGUCUACAGCCAUGGUUGccuggaguggacg
.((.(((((((.(((((((((((.(((((((((((((.((........))))))))))))))).))))))))))))))))))))....

Structure

---g  u       g           U             u  gga 
    cg cuccagg caACCGUGGCU UAGAUUGUUACUg gu   u
    || ||||||| ||||||||||| ||||||||||||| ||    
    gu gaggucc GUUGGUACCGA AUCUGACAAUggu cg   g
gcag  -       -           C             -  ggu

Annotation confidence Not enough data

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Genome context

KE962683.1: 6379-6466 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pbv-mir-132

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pbv-miR-132-5p

Accession	MIMAT0038933
Description	Python bivittatus pbv-miR-132-5p mature miRNA
Sequence	15 - ACCGUGGCUUUAGAUUGUUACU - 36
Evidence	experimental Illumina [1]

Mature pbv-miR-132-3p

Accession	MIMAT0038934
Description	Python bivittatus pbv-miR-132-3p mature miRNA
Sequence	54 - UAACAGUCUACAGCCAUGGUUG - 75
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196