Stem-loop chi-mir-346

Accession

MI0030756

Description

Capra hircus chi-mir-346 precursor miRNA

Gene family

MIPF0000188; mir-346

Sequence

ggucucuguguugggcgucUGUCUGCCCGCAUGCCUGCCUCUcuguugcucugaaggaggcaggggcugggcuugcagcugccugggcagagcggauccugcgugggaca
.((((((((...(((.((((((((((((((...((((((((.((..........))))))))))(((((......)))))))..))))))).))))))))))).))))).

Structure

g     -   guu   c     -       --  -------------AUG        U  guug 
 gucuc ugu   ggg gucUG UCUGCCC  GC                CCUGCCUC cu    c
 ||||| |||   ||| ||||| |||||||  ||                |||||||| ||     
 caggg gcg   ucc uaggc agacggg  cg                ggacggag ga    u
a     u   ---   -     g       uc  ucgacguucgggucgg        -  aguc 

Annotation confidence Not enough data

Genome context

chr28: 40878616-40878725 [-]

Mature chi-miR-346-5p

• Accession: MIMAT0036165
• Description: Capra hircus chi-miR-346-5p mature miRNA
• Sequence: 20 - UGUCUGCCCGCAUGCCUGCCUCU - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40