Stem-loop gma-MIR9750

Accession

MI0031040

Description

Glycine max gma-MIR9750 precursor miRNA

Literature search

1 open access papers mention gma-MIR9750
(1 sentences)

Sequence

cauuucagAGGCGCGUAUGGACUUACGACCugaagauuauuucuuccugaugaagcuaaagaucuggaucgaggaagcagaaggcaugguauaacugcuccucuucaagagcuucaucaccagcauuaucuucaggUGUAAGUCCAUAUGUGCUCUCUaaaau
.((((.((((((((((((((((((((.((((((((((.....((...(((((((((......(((.((..(((((.((((...((...))....))))))))).)).))))))))))))..))....)))))))))))))))))))))))))).)))).))))

Structure

c    c    -                G          uauuu  ucc         uaaaga   g  uc     a    -aag  a 
 auuu agAG GCGCGUAUGGACUUAC ACCugaagau     cu   ugaugaagc      ucu ga  gagga gcag    gc  
 |||| |||| |||||||||||||||| ||||||||||     ||   |||||||||      ||| ||  ||||| ||||    || u
 uaaa UCUC CGUGUAUACCUGAAUG Uggacuucua     ga   acuacuucg      aga cu  cuccu cguc    ug  
-    a    U                -          -uuac  -cc         ------   a  -u     -    aaua  g 

Annotation confidence Not enough data

Genome context

chr6: 14495616-14495778 [-]

Mature gma-miR9750-3p

• Accession: MIMAT0036378
• Description: Glycine max gma-miR9750-3p mature miRNA
• Sequence: 137 - UGUAAGUCCAUAUGUGCUCUCU - 158
• Evidence: experimental ; Illumina [1]

Mature gma-miR9750-5p

• Accession: MIMAT0039317
• Description: Glycine max gma-miR9750-5p mature miRNA
• Sequence: 9 - AGGCGCGUAUGGACUUACGACC - 30
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153


2. PubMed ID: 25465409
   An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
   "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
   "Plant Cell (2014) 26:4584-4601