miRBase entry: cja-mir-514a

Stem-loop cja-mir-514a


Accession
MI0032105
Description
Callithrix jacchus cja-mir-514a precursor miRNA


Sequence

cuacuccaaagagugucagucauauguaauucaauuugAUUGACACUUUUGUGAGUAG
((((((..((((((((((((((.((........)).))))))))))))))..))))))

Structure
      ca              u  gua 
cuacuc  aagagugucaguca au   a
||||||  |||||||||||||| ||    
GAUGAG  UUUUCACAGUUAgu ua   u
      UG              u  acu 


Annotation confidence Not enough data
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Genome context
chrX: 134472106-134472163 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-mir-514a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-514a

Accession MIMAT0039573
Description Callithrix jacchus cja-miR-514a mature miRNA
Sequence 39 - AUUGACACUUUUGUGAGUAG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857