Stem-loop cja-mir-580

Accession

MI0032183

Description

Callithrix jacchus cja-mir-580 precursor miRNA

Sequence

gauaaaauuucugauaggucccuaaugaucauagacucagauauuuaaguuaacaguauUUGAGUCUGAUGAAUCAUUAGGuuccaaucauaaauuuuuc
...(((((((.((((.((..(((((((((((((((((((((((((.........))))))))))))).))).)))))))))..)).)))).)))))))..

Structure

gau       c    a  uc         -   -             uaa 
   aaaauuu ugau gg  ccuaaugau cau agacucagauauu   g
   ||||||| |||| ||  ||||||||| ||| |||||||||||||   u
   uuuuaaa acua cc  GGAUUACUA GUA UCUGAGUUuauga   u
-cu       u    a  uu         A   G             caa 

Annotation confidence Not enough data

Genome context

chr2: 167456609-167456708 [+]

Mature cja-miR-580

• Accession: MIMAT0039646
• Description: Callithrix jacchus cja-miR-580 mature miRNA
• Sequence: 60 - UUGAGUCUGAUGAAUCAUUAGG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857