miRBase entry: cja-mir-9919

Stem-loop cja-mir-9919


Accession
MI0032225
Description
Callithrix jacchus cja-mir-9919 precursor miRNA


Sequence

gggguuauuccuucagugAAGGAAGUACCUUUGAAGGGuacuuuauuugguaguaccuugaaagguacuuccuucagugaaggaaguaacugc
(.(((((((((((((.((((((((((((((((..((((((((.........)))))))).)))))))))))))))).)))))).))))))).)

Structure
 g       -      g                GA        uua 
g gguuauu ccuuca ugAAGGAAGUACCUUU  AGGGuacu   u
| ||||||| |||||| ||||||||||||||||  ||||||||   u
c ucaauga ggaagu acuuccuucauggaaa  uuccauga   u
 g       a      g                -g        ugg 


Annotation confidence Not enough data
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Genome context
chr4: 119884329-119884421 [+]

Database links

Mature cja-miR-9919

Accession MIMAT0039682
Description Callithrix jacchus cja-miR-9919 mature miRNA
Sequence 19 - AAGGAAGUACCUUUGAAGGG - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857