Stem-loop cja-mir-9952b

Accession

MI0032232

Description

Callithrix jacchus cja-mir-9952b precursor miRNA

Sequence

ucaagugaauaucauuuuugacugccguugugaaucagaccucaguugucauggacuguagcgaccagucaguggagauucugACCAACUGAGGACUGAUUGAUgauguccgucaaaagauggcauaacuuaga
..((((..((.(((((((((((.(.((((((.((((((.((((((((((((.(((((.((..((....))..)).)).)))))).))))))))).)))))).)))))).).))).)))))))).)).))))...

Structure

-uc    ga  a        -   u c      g      a         -   u   -  g  gc  c 
   aagu  au ucauuuuu gac g cguugu aaucag ccucaguug uca gga cu ua  ga c
   ||||  || |||||||| ||| | |||||| |||||| ||||||||| ||| ||| || ||  ||  
   uuca  ua gguagaaa cug c guagUA UUAGUC GGAGUCAAC Agu cuu ga gu  cu a
aga    -a  c        a   c u      G      A         C   -   a  g  ga  g 

Annotation confidence Not enough data

Genome context

GL284850.1: 33155-33288 [-]

Mature cja-miR-9952b

• Accession: MIMAT0039688
• Description: Callithrix jacchus cja-miR-9952b mature miRNA
• Sequence: 84 - ACCAACUGAGGACUGAUUGAU - 104
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857