miRBase entry: pal-mir-211

Stem-loop pal-mir-211


Accession
MI0032618
Description
Pteropus alecto pal-mir-211 precursor miRNA


Sequence

UUCCCUUUGUCAUCCUUUGCCUagggcucugagugggGCAGGGACAGCAAAGGGGUGC
.(((((((((..(((((.((((...(((...))).)))))))))..)))))))))...

Structure
--U         CA     U    agg   c 
   UCCCUUUGU  UCCUU GCCU   gcu  
   |||||||||  ||||| ||||   ||| u
   GGGGAAACG  AGGGA CGgg   uga  
CGU         AC     -    --g   g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB030428.1: 1648093-1648150 [+]

Database links

Mature pal-miR-211-5p

Accession MIMAT0040335
Description Pteropus alecto pal-miR-211-5p mature miRNA
Sequence 1 - UUCCCUUUGUCAUCCUUUGCCU - 22
Evidence experimental
Illumina [1]

Mature pal-miR-211-3p

Accession MIMAT0040336
Description Pteropus alecto pal-miR-211-3p mature miRNA
Sequence 38 - GCAGGGACAGCAAAGGGGUGC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682