Stem-loop hpo-mir-10149

Accession

MI0032899

Description

Heligmosomoides polygyrus hpo-mir-10149 precursor miRNA

Sequence

GCUUGGCGCCUGGAGGUCGUCGGgccgccauaguggucaguuggaccuccggcuuggccuGUUCCUUCUGGUCGUCGUAGC
((((((((((.(((((....(((((((((...(.((((.....)))).).)))..))))))..))))).)).))))).)))

Structure

   -     -  U     UCGU      --   aua u    a 
GCU UGGCG CC GGAGG    CGGgcc  gcc   g gguc g
||| ||||| || |||||    ||||||  |||   | |||| u
CGA GCUGC GG CUUCC    Guccgg  cgg   c ccag u
   U     U  U     --UU      uu   --c u    g 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_38221: 1395-1475 [+]

Mature hpo-miR-10149-5p

• Accession: MIMAT0040880
• Description: Heligmosomoides polygyrus hpo-miR-10149-5p mature miRNA
• Sequence: 1 - GCUUGGCGCCUGGAGGUCGUCGG - 23
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10149-3p

• Accession: MIMAT0040881
• Description: Heligmosomoides polygyrus hpo-miR-10149-3p mature miRNA
• Sequence: 61 - GUUCCUUCUGGUCGUCGUAGC - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488