Stem-loop vca-MIR10202a

Accession

MI0032998

Description

Vriesea carinata vca-MIR10202a precursor miRNA

Sequence

acgauccaacccucuaguAAUAAUAAUUCGUUGGGCCCAAACcaucugacauucucgucaguccaaucacacauauagaccaauaucauuauggacccuaguaauaauaauuggguuuaaguauuuuggguuaaugguuUGAACCCAACGAGUUAUUAUUGCUaguggagcgggucgu
(((((((...((.((((((((((((((((((((((..(((((((((((((......)))))..................((((.((.(((.(((((((..............)))))))))))).))))....))))))))..)))))))))))))))))))))).))...)))))))

Structure

       aac  u                      CC        cugacauucucgucaguccaaucacacauauaga    u  c   a       uaguaa 
acgaucc   cc cuaguAAUAAUAAUUCGUUGGG  CAAACcau                                  ccaa au auu uggaccc      u
|||||||   || ||||||||||||||||||||||  ||||||||                                  |||| || ||| |||||||       
ugcuggg   gg gaUCGUUAUUAUUGAGCAACCC  GUuuggua                                  gguu ua uga auuuggg      a
       cga  u                      AA        ------------------------------auug    u  -   -       uuaaua 

Annotation confidence Not enough data

Genome context

Unknown

Mature vca-miR10202a-5p

• Accession: MIMAT0041023
• Description: Vriesea carinata vca-miR10202a-5p mature miRNA
• Sequence: 19 - AAUAAUAAUUCGUUGGGCCCAAAC - 42
• Evidence: experimental ; Illumina [1]

Mature vca-miR10202a-3p

• Accession: MIMAT0041024
• Description: Vriesea carinata vca-miR10202a-3p mature miRNA
• Sequence: 140 - UGAACCCAACGAGUUAUUAUUGCU - 163
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23849128
   Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
   "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
   "Plant Sci (2013) 210:214-223