miRBase entry: cgr-let-7a-2

Stem-loop cgr-let-7a-2


Accession
MI0033058
Description
Cricetulus griseus cgr-let-7a-2 precursor miRNA


Sequence

7642571 reads, 106130 reads per million, 6 experiments
agguugagguaguagguuguauaguuuagaguuacaucaagggagauaaCUGUACAGCCUCCUAGCUUUCCu
(((..(((.(((.(((((((((((((.........(((......)))))))))))))))).))).))).)))

Structure
   uu   g   u             uagaguuac   aa 
agg  gag uag agguuguauaguu         auc  g
|||  ||| ||| |||||||||||||         |||   
uCC  UUC AUC UCCGACAUGUCaa         uag  g
   -U   G   C             ---------   ag 


Annotation confidence High
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Genome context
JH002112.1: 148260-148331 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cgr-let-7a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cgr-let-7a-2

Accession MIMAT0041130
Description Cricetulus griseus cgr-let-7a-2 mature miRNA
Sequence 50 - CUGUACAGCCUCCUAGCUUUCC - 71
Evidence not_experimental

References

  1. PubMed ID: 25689160
    Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
    "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
    "Biotechnol Bioeng (2015) 112:1488-1493