miRBase entry: tcf-mir-279c

Stem-loop tcf-mir-279c


Accession
MI0033229
Description
Triops cancriformis tcf-mir-279c precursor miRNA


Sequence

ggcgagugggcaucugguacauguguuuucacuaaguuggucaUGACUAGAUCCCACACUCGUCCGG
((((((((((.(((((((.((((..................))))))))))).)).))))))))...

Structure
---        -  c       a    uguuuuca 
   ggcgagug gg aucuggu caug        c
   |||||||| || ||||||| ||||         
   CUGCUCAC CC UAGAUCA GUac        u
GGC        A  C       -    ugguugaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tcf-miR-279c

Accession MIMAT0041394
Description Triops cancriformis tcf-miR-279c mature miRNA
Sequence 44 - UGACUAGAUCCCACACUCGUCCGG - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25525151
    Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
    "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
    "RNA (2015) 21:230-242