miRBase entry: abu-mir-129-3

Stem-loop abu-mir-129-3


Accession
MI0033831
Description
Astatotilapia burtoni abu-mir-129-3 precursor miRNA


Sequence

CUUUUUGCGGUCUGGGCUUGCuguuccuaaggcaguagccaggaagcccuuaccccaaaaaguau
(((((((.(((..((((((.(((...(((......))).))).))))))..))).)))))))...

Structure
---       C   CU      G   uuc   ag 
   CUUUUUG GGU  GGGCUU Cug   cua  g
   ||||||| |||  |||||| |||   |||   
   gaaaaac cca  cccgaa gac   gau  c
uau       c   uu      g   --c   ga 


Annotation confidence Not enough data
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Genome context
JH425437.1: 464280-464344 [-]

Database links

Mature abu-miR-129

Accession MIMAT0042120
Description Astatotilapia burtoni abu-miR-129 mature miRNA
Sequence 1 - CUUUUUGCGGUCUGGGCUUGC - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381