miRBase entry: abu-mir-124-1

Stem-loop abu-mir-124-1


Accession
MI0033894
Description
Astatotilapia burtoni abu-mir-124-1 precursor miRNA


Sequence

cguguucacggcggaccuugauuuauuagccauacaauUAAGGCACGCGGUGAAUGCC
.((((((((.(((..(((((((((((.....))).))))))))..))).)))))))).

Structure
c        g   ga        -   u 
 guguucac gcg  ccuugauu uau a
 |||||||| |||  |||||||| ||| g
 CGUAAGUG CGC  GGAAUuaa aua c
C        G   AC        c   c 


Annotation confidence Not enough data
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Genome context
JH425442.1: 570541-570598 [+]

Database links

Mature abu-miR-124

Accession MIMAT0042170
Description Astatotilapia burtoni abu-miR-124 mature miRNA
Sequence 39 - UAAGGCACGCGGUGAAUGCC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381