Stem-loop abu-mir-218b

Accession

MI0033897

Description

Astatotilapia burtoni abu-mir-218b precursor miRNA

Sequence

UUGUGCUUGAUCUAACCAUGCAgugcaucuucuguccaugguugugccaagcaccuug
..(((((((...(((((((((((........)))..))))))))...)))))))....

Structure

--UU       AUC        --   ugc 
    GUGCUUG   UAACCAUG  CAg   a
    |||||||   ||||||||  |||    
    cacgaac   guugguac  guc   u
guuc       cgu        cu   uuc 

Annotation confidence Not enough data

Genome context

JH425495.1: 103665-103722 [+]

Mature abu-miR-218b

• Accession: MIMAT0042171
• Description: Astatotilapia burtoni abu-miR-218b mature miRNA
• Sequence: 1 - UUGUGCUUGAUCUAACCAUGCA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381