Stem-loop abu-mir-454b

Accession

MI0033980

Description

Astatotilapia burtoni abu-mir-454b precursor miRNA

Sequence

ccuaucaguauugccucugcuuucacuagaguuaacagagUAGUGCAAUAUUGCUUAUAGGG
((((((((((((((..(((((((.............))))))).)))))))))...))))).

Structure

-     ---         cu       cacua 
 ccuau   caguauugc  cugcuuu     g
 |||||   |||||||||  |||||||     a
 GGAUA   GUUAUAACG  GAUgaga     g
G     UUC         -U       caauu 

Annotation confidence Not enough data

Genome context

JH426012.1: 175433-175494 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from abu-mir-454b

Mature abu-miR-454b

• Accession: MIMAT0042247
• Description: Astatotilapia burtoni abu-miR-454b mature miRNA
• Sequence: 41 - UAGUGCAAUAUUGCUUAUAGGG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381