Stem-loop pny-mir-155

Accession

MI0034951

Description

Pundamilia nyererei pny-mir-155 precursor miRNA

Sequence

UUAAUGCUAAUCGUGAUAGGGGUuguucuuauuaacagacaccuaacauguuagcauuagcu
((((((((((.((((.(((((..((((......))))..).)))).))))))))))))))..

Structure

--          U    A    - GU    cu 
  UUAAUGCUAA CGUG UAGG G  uguu  u
  |||||||||| |||| |||| |  ||||   
  gauuacgauu guac aucc c  acaa  a
uc          -    a    a ag    uu 

Annotation confidence Not enough data

Genome context

JH419216.1: 2863542-2863603 [+]

Mature pny-miR-155

• Accession: MIMAT0042961
• Description: Pundamilia nyererei pny-miR-155 mature miRNA
• Sequence: 1 - UUAAUGCUAAUCGUGAUAGGGGU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381