Stem-loop pny-mir-196b

Accession

MI0034984

Description

Pundamilia nyererei pny-mir-196b precursor miRNA

Sequence

UAGGUAGUCUCAUGUUGUUGGGCuauauuauuucucccacaacacaaaacugccuuga
.(((((((....((((((.(((.............)))))))))....)))))))...

Structure

--U       CUCA      U   Cuaua 
   AGGUAGU    UGUUGU GGG     u
   |||||||    |||||| |||     u
   uccguca    acaaca ccc     a
agu       aaac      -   ucuuu 

Annotation confidence Not enough data

Genome context

JH419289.1: 1086846-1086903 [+]

Mature pny-miR-196b

• Accession: MIMAT0042980
• Description: Pundamilia nyererei pny-miR-196b mature miRNA
• Sequence: 1 - UAGGUAGUCUCAUGUUGUUGGGC - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381