miRBase entry: oni-mir-204b

Stem-loop oni-mir-204b

Accession

MI0035167

Description

Oreochromis niloticus oni-mir-204b precursor miRNA

Literature search

1 open access papers mention oni-mir-204b
(1 sentences)

Sequence

aucccuuugcugucccugccuuauccaaguuccaggCAUAGGAUGACAAAGGGAAGCC
.((((((((.(((((.(((((............)))))..))))).))))))))....

Structure

---a        c     -c     uaucc 
    ucccuuug ugucc  ugccu     a
    |||||||| |||||  |||||      
    AGGGAAAC GUAGG  ACgga     a
CCGA        A     AU     ccuug

Annotation confidence Not enough data

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Genome context

CM001450.1: 38761818-38761875 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-204b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-204b

Accession	MIMAT0043145
Description	Oreochromis niloticus oni-miR-204b mature miRNA
Sequence	37 - CAUAGGAUGACAAAGGGAAGCC - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774