miRBase entry: oni-mir-10720-1

Stem-loop oni-mir-10720-1


Accession
MI0035246
Description
Oreochromis niloticus oni-mir-10720-1 precursor miRNA


Sequence

AGUGACUGAGCCUGUAAAGACAucaagaaauugucuuuacaggcucagucacuca
((((((((((((((((((((((.........))))))))))))))))))))))..

Structure
--                      uca 
  AGUGACUGAGCCUGUAAAGACA   a
  ||||||||||||||||||||||   g
  ucacugacucggacauuucugu   a
ac                      uaa 


Annotation confidence Not enough data
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Genome context
CM001463.1: 18703314-18703368 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from oni-mir-10720-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oni-miR-10720

Accession MIMAT0043221
Description Oreochromis niloticus oni-miR-10720 mature miRNA
Sequence 1 - AGUGACUGAGCCUGUAAAGACA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774