miRBase entry: gmo-mir-26b

Stem-loop gmo-mir-26b


Accession
MI0036124
Description
Gadus morhua gmo-mir-26b precursor miRNA


Sequence

UUCAAGUAAUCCAGGAUAGGUUuguucugacaagcaguaaagccuauucaggaugacuuguuu
..(((((.((((.((((((((((...(((.....)))..)))))))))).)))).)))))...

Structure
-UU     A    A          guu   a 
   CAAGU AUCC GGAUAGGUUu   cug c
   ||||| |||| ||||||||||   ||| a
   guuca uagg cuuauccgaa   gac a
uuu     g    a          -au   g 


Annotation confidence Not enough data
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Genome context
HE571522.1: 39027-39089 [+]

Database links

Mature gmo-miR-26b-5p

Accession MIMAT0044207
Description Gadus morhua gmo-miR-26b-5p mature miRNA
Sequence 1 - UUCAAGUAAUCCAGGAUAGGUU - 22
Evidence experimental
SOLiD [1], Illumina [2]

References

  1. PubMed ID: 25881242
    Temperature during early development has long-term effects on microRNA expression in Atlantic cod
    Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
    BMC Genomics (2015) 16:305

  2. PubMed ID: 27128807
    Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
    Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
    PLoS One (2016) 11:e0153324