miRBase entry: gmo-mir-181a-2

Stem-loop gmo-mir-181a-2

Accession

MI0036210

Description

Gadus morhua gmo-mir-181a-2 precursor miRNA

Literature search

1 open access papers mention gmo-mir-181a-2
(4 sentences)

Sequence

AACAUUCAACGCUGUCGGUGAGUuuaaacugaggaaaaccaucgaucguugacuguac
.(((.((((((..(((((((.((((..........))))))))))))))))).)))..

Structure

-A   U      CU       A    aaac 
  ACA UCAACG  GUCGGUG GUuu    u
  ||| ||||||  ||||||| ||||     
  ugu aguugc  uagcuac caaa    g
ca   c      --       -    agga

Annotation confidence Not enough data

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Genome context

HE570074.1: 250660-250717 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gmo-mir-181a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature gmo-miR-181a-5p

Accession	MIMAT0044090
Description	Gadus morhua gmo-miR-181a-5p mature miRNA
Sequence	1 - AACAUUCAACGCUGUCGGUGAGU - 23
Evidence	experimental SOLiD [1]

References

PubMed ID: 25881242
Temperature during early development has long-term effects on microRNA expression in Atlantic cod
Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
BMC Genomics (2015) 16:305