miRBase entry: gmo-mir-181b-2

Stem-loop gmo-mir-181b-2

Accession

MI0036211

Description

Gadus morhua gmo-mir-181b-2 precursor miRNA

Literature search

1 open access papers mention gmo-mir-181b-2
(1 sentences)

Sequence

AACAUUCAUUGCUGUCGGUGGGUUucugguugaaaugacucauugacgaaugaaugcaga
..((((((((..((((((((((((((.....))...))))))))))))))))))))....

Structure

--AA        GC            ---  u 
    CAUUCAUU  UGUCGGUGGGUU   uc g
    ||||||||  ||||||||||||   || g
    guaaguaa  gcaguuacucag   ag u
agac        --            uaa  u

Annotation confidence Not enough data

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Genome context

HE570074.1: 251038-251097 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gmo-mir-181b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature gmo-miR-181b-5p

Accession	MIMAT0044134
Description	Gadus morhua gmo-miR-181b-5p mature miRNA
Sequence	1 - AACAUUCAUUGCUGUCGGUGGGUU - 24
Evidence	experimental SOLiD [1]

References

PubMed ID: 25881242
Temperature during early development has long-term effects on microRNA expression in Atlantic cod
Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
BMC Genomics (2015) 16:305