Stem-loop pab-MIR11549

Accession

MI0037043

Description

Picea abies pab-MIR11549 precursor miRNA

Sequence

uagagguggagcguguuacuuggccaagaaugacuugccuacaugacagacgugauuagaauggcaacuaacugaacuuuuuuccauucauuuagagugcuguuuUGUGAGCAAGUCAUUCUGGCCaaccaacccguuguucuuuug
((((((.(.((((.(((..(((((((.(((((((((((.((((.(((((((.......((((((.((..((......))..)))))))).......)).))))).)))).))))))))))))))))))..))).)))).).))))))

Structure

      u g    u   ac       a           c    u     -  gugauua      c  cu  cu 
uagagg g agcg guu  uuggcca gaaugacuugc uaca gacag ac       gaaugg aa  aa  g
|||||| | |||| |||  ||||||| ||||||||||| |||| ||||| ||       |||||| ||  ||   
guuuuc u uugc caa  aaCCGGU CUUACUGAACG GUGU uuguc ug       cuuacc uu  uu  a
      u g    c   cc       -           A    u     g  agauuua      -  uu  ca 

Annotation confidence Not enough data

Genome context

MA_15062: 34170-34316 [-]

Mature pab-miR11549

• Accession: MIMAT0045141
• Description: Picea abies pab-miR11549 mature miRNA
• Sequence: 106 - UGUGAGCAAGUCAUUCUGGCC - 126
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918