miRBase entry: tca-mir-3851i

Stem-loop tca-mir-3851i

Accession

MI0037389

Description

Tribolium castaneum tca-mir-3851i precursor miRNA

Sequence

ucauugaauuuaacauugAGUGGAUAUGGGGUGGUACUGUGaauuuuuugaacaUAGUACGGCCCAUGUCGGCUCAcugauaaauuccauuu
.....(((((((.((.(((((.((((((((.(.((((((((...........)))))))).))))))))).))))).)).))))))).....

Structure

ucauu       a  u     G        G G        aauu 
     gaauuua ca ugAGU GAUAUGGG U GUACUGUG    u
     ||||||| || ||||| |||||||| | ||||||||    u
     cuuaaau gu ACUCG CUGUACCC G CAUGAUac    u
uuuac       a  c     G        - G        aagu

Annotation confidence Not enough data

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Genome context

ChLG6: 273027-273118 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from tca-mir-3851i

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tca-miR-3851i-5p

Accession	MIMAT0045534
Description	Tribolium castaneum tca-miR-3851i-5p mature miRNA
Sequence	19 - AGUGGAUAUGGGGUGGUACUGUG - 41
Evidence	experimental Illumina [1]

Mature tca-miR-3851i-3p

Accession	MIMAT0045535
Description	Tribolium castaneum tca-miR-3851i-3p mature miRNA
Sequence	55 - UAGUACGGCCCAUGUCGGCUCA - 76
Evidence	experimental Illumina [1]

References

PubMed ID: 26518483
MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"Genome Res (2016) 26:85-96